SMTL ID : 2jkz.1 (1 other biounit)

SACCHAROMYCES CEREVISIAE HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE IN COMPLEX WITH GMP (GUANOSINE 5'- MONOPHOSPHATE) (ORTHORHOMBIC CRYSTAL FORM)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.45 Å

Oligo State

homo-dimer

Ligands

2 x 5GP: GUANOSINE-5'-MONOPHOSPHATE(Non-covalent)

5GP.1: 14 residues within 4Å: Chain A: D.109, E.110, V.111, D.113, T.114, R.115, T.116, T.117, K.158, K.186, W.187, Y.188, Y.190, E.193 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:D.109, A:E.110, A:D.113, A:T.114, A:T.114, A:R.115, A:T.116, A:T.117, A:T.117, A:K.158, A:Y.188, A:Y.188, A:Y.188 Salt bridges: A:E.193 pi-Stacking: A:W.187 5GP.3: 14 residues within 4Å: Chain B: D.109, E.110, V.111, D.113, T.114, R.115, T.116, T.117, K.158, K.186, W.187, Y.188, Y.190, E.193 15 PLIP interactions: 15 interactions with chain B Hydrogen bonds: B:D.109, B:E.110, B:D.113, B:T.114, B:T.114, B:R.115, B:T.116, B:T.117, B:T.117, B:K.158, B:Y.188, B:Y.188, B:Y.188 Salt bridges: B:E.193 pi-Stacking: B:W.187

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: G.36, G.37, G.38 Chain B: R.44, R.47 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:G.37, A:G.38 Salt bridges: B:R.44, B:R.47 SO4.4: 5 residues within 4Å: Chain A: R.44, R.47 Chain B: G.36, G.37, G.38 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:G.37, B:G.38 Salt bridges: A:R.44, A:R.47

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moynie, L. et al., Functional Significance of Four Successive Glycine Residues in the Pyrophosphate Binding Loop of Fungal 6-Oxopurine Phosphoribosyltransferases. Protein Sci. (2012)

Release Date

2009-11-17

Peptides

HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE

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