- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.81 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x TPP: THIAMINE DIPHOSPHATE(Non-covalent)
- 5 x MN: MANGANESE (II) ION(Non-covalent)
MN.2: 4 residues within 4Å:- Chain A: D.444, N.471, G.473
- Ligands: TPP.1
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.444, A:G.473, H2O.98
MN.7: 4 residues within 4Å:- Chain B: D.444, N.471, G.473
- Ligands: TPP.6
3 PLIP interactions:2 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:D.444, B:G.473, H2O.197
MN.13: 4 residues within 4Å:- Chain C: D.444, N.471, G.473
- Ligands: TPP.12
3 PLIP interactions:2 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:D.444, C:G.473, H2O.283
MN.17: 2 residues within 4Å:- Chain C: H.511, D.525
3 PLIP interactions:2 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:H.511, C:D.525, H2O.284
MN.19: 4 residues within 4Å:- Chain D: D.444, N.471, G.473
- Ligands: TPP.18
3 PLIP interactions:2 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:D.444, D:G.473, H2O.395
- 13 x CL: CHLORIDE ION(Non-functional Binders)
CL.3: 5 residues within 4Å:- Chain A: G.33, S.34, R.35, T.80, Q.120
Ligand excluded by PLIPCL.4: 5 residues within 4Å:- Chain A: N.392, S.393, R.397, R.415, S.418
Ligand excluded by PLIPCL.5: 1 residues within 4Å:- Chain A: E.507
Ligand excluded by PLIPCL.8: 5 residues within 4Å:- Chain B: G.33, S.34, R.35, T.80, Q.120
Ligand excluded by PLIPCL.9: 4 residues within 4Å:- Chain B: P.139, R.140
- Chain D: P.139, R.140
Ligand excluded by PLIPCL.10: 4 residues within 4Å:- Chain B: N.392, S.393, R.397, R.415
Ligand excluded by PLIPCL.11: 4 residues within 4Å:- Chain B: L.508, K.509, T.531, T.532
Ligand excluded by PLIPCL.14: 6 residues within 4Å:- Chain C: G.33, S.34, R.35, T.80, Q.120
- Ligands: TPP.18
Ligand excluded by PLIPCL.15: 4 residues within 4Å:- Chain A: P.139, R.140
- Chain C: P.139, R.140
Ligand excluded by PLIPCL.16: 5 residues within 4Å:- Chain C: N.392, S.393, R.397, R.415, S.418
Ligand excluded by PLIPCL.20: 5 residues within 4Å:- Chain D: G.33, S.34, R.35, T.80, Q.120
Ligand excluded by PLIPCL.21: 4 residues within 4Å:- Chain D: N.392, S.393, R.397, R.415
Ligand excluded by PLIPCL.22: 2 residues within 4Å:- Chain D: T.245, K.343
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dawson, A. et al., Specificity and Reactivity in Menaquinone Biosynthesis: The Structure of Escherichia Coli Mend (2-Succinyl-5-Enolpyruvyl-6-Hydroxy-3-Cyclohexadiene-1-Carboxylate Synthase). J.Mol.Biol. (2008)
- Release Date
- 2008-10-21
- Peptides
- 2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE -1-CARBOXYLATE SYNTHASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.81 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x TPP: THIAMINE DIPHOSPHATE(Non-covalent)
- 5 x MN: MANGANESE (II) ION(Non-covalent)
- 13 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dawson, A. et al., Specificity and Reactivity in Menaquinone Biosynthesis: The Structure of Escherichia Coli Mend (2-Succinyl-5-Enolpyruvyl-6-Hydroxy-3-Cyclohexadiene-1-Carboxylate Synthase). J.Mol.Biol. (2008)
- Release Date
- 2008-10-21
- Peptides
- 2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE -1-CARBOXYLATE SYNTHASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D