SMTL ID : 2joa.1

HtrA1 bound to an optimized peptide: NMR assignment of PDZ domain and ligand resonances

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x ASP- SER- ARG- ILE- TRP- TRP- VAL: Peptide H1-C1(Non-covalent)

ASP-SER-ARG-ILE-TRP-TRP-VAL.1: 20 residues within 4Å: Chain A: K.5, K.6, Y.7, I.8, G.9, I.10, R.11, M.12, M.13, S.14, T.16, S.18, K.19, I.40, I.43, A.70, N.71, S.74, I.77, K.78 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:R.11, A:I.40, A:A.70, A:N.71, A:I.77 Hydrogen bonds: A:Y.7, A:I.8, A:G.9, A:I.10, A:I.10, A:I.10, A:M.12, A:M.12, A:S.14 pi-Cation interactions: A:R.11, A:R.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Runyon, S.T. et al., Structural and functional analysis of the PDZ domains of human HtrA1 and HtrA3. Protein Sci. (2007)

Release Date

2007-11-20

Peptides

Serine protease HTRA1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine protease HTRA1