SMTL ID : 2jpr.1

Joint refinement of the HIV-1 CA-NTD in complex with the assembly inhibitor CAP-1

Coordinates

PDB Format

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x JPR: 1-(3-chloro-4-methylphenyl)-3-{2-[({5-[(dimethylamino)methyl]-2-furyl}methyl)thio]ethyl}urea(Non-covalent)

JPR.1: 17 residues within 4Å: Chain A: W.23, V.24, V.27, E.28, A.31, F.32, V.36, L.56, T.58, V.59, G.61, H.62, A.65, M.66, L.69, L.138, I.141 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.24, A:A.31, A:V.59, A:A.65, A:L.138, A:I.141 Hydrogen bonds: A:V.59, A:V.59, A:H.62 Salt bridges: A:E.28

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kelly, B.N. et al., Structure of the Antiviral Assembly Inhibitor CAP-1 Complex with the HIV-1 CA Protein. J.Mol.Biol. (2007)

Release Date

2007-10-09

Peptides

Gag-Pol polyprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Gag-Pol polyprotein

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