SMTL ID : 2k4i.1

Solution structure of HIV-2 myrMA bound to di-C4-PI(4,5)P2

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x MYR: MYRISTIC ACID(Covalent)

MYR.1: 12 residues within 4Å: Chain A: G.1, V.6, L.7, L.15, I.33, A.37, E.47, L.50, E.51, I.84, I.87, H.88 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.7, A:L.15, A:I.33, A:A.37, A:L.50, A:I.87

1 x PBU: (2R)-3-{[(R)-HYDROXY{[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIHYDROXY-4,5-BIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPANE-1,2-DIYL DIBUTANOATE(Non-covalent)

PBU.2: 14 residues within 4Å: Chain A: L.20, R.21, K.26, Y.28, H.32, W.35, A.36, E.72, K.75, S.76, L.77, N.79, T.80, T.96 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:L.20, A:K.26, A:W.35, A:S.76, A:N.79 Salt bridges: A:R.21, A:K.26, A:H.32, A:K.75

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Saad, J.S. et al., Structure of the myristylated human immunodeficiency virus type 2 matrix protein and the role of phosphatidylinositol-(4,5)-bisphosphate in membrane targeting. J.Mol.Biol. (2008)

Release Date

2008-08-12

Peptides

HIV-2 myristoylated matrix protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

HIV-2 myristoylated matrix protein

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