SMTL ID : 2ka9.1

Solution structure of PSD-95 PDZ12 complexed with cypin peptide

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

monomer

Ligands

2 x GLN- VAL- VAL- PRO- PHE- SER- SER- SER- VAL: cypin peptide(Non-covalent)

GLN-VAL-VAL-PRO-PHE-SER-SER-SER-VAL.1: 15 residues within 4Å: Chain A: G.14, L.15, G.16, F.17, S.18, I.19, A.20, N.25, P.26, H.27, T.37, I.40, H.70, V.74, L.77 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.17, A:L.77 Hydrogen bonds: A:L.15, A:G.16, A:F.17, A:F.17, A:I.19, A:I.19, A:N.25 GLN-VAL-VAL-PRO-PHE-SER-SER-SER-VAL.2: 15 residues within 4Å: Chain A: K.108, G.109, L.110, G.111, F.112, S.113, I.114, A.115, N.120, T.132, I.135, H.165, V.169, L.172, K.173 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.112, A:L.172 Hydrogen bonds: A:L.110, A:G.111, A:F.112, A:F.112, A:S.113, A:S.113, A:S.113, A:I.114, A:I.114, A:N.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, W.N. et al., Creating conformational entropy by increasing interdomain mobility in ligand binding regulation: a revisit to N-terminal tandem PDZ domains of PSD-95. J.Am.Chem.Soc. (2009)

Release Date

2009-06-23

Peptides

Disks large homolog 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Disks large homolog 4