SMTL ID : 2kqe.1

Second PBZ domain of human APLF protein in complex with ribofuranosyladenosine

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: C.59, Y.61, C.65, R.67, H.72, H.78 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.59, A:C.65, A:H.72, A:H.78

1 x ADN: ADENOSINE(Non-covalent)

ADN.2: 6 residues within 4Å: Chain A: Y.61, S.64, C.65, Y.66, R.67 Ligands: RIB.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.64, A:Y.66 pi-Stacking: A:Y.61, A:Y.66

1 x RIB: alpha-D-ribofuranose(Non-covalent)

RIB.3: 5 residues within 4Å: Chain A: Y.61, Y.66, R.67, N.69 Ligands: ADN.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eustermann, S. et al., Solution structures of the two PBZ domains from human APLF and their interaction with poly(ADP-ribose). Nat.Struct.Mol.Biol. (2010)

Release Date

2010-01-19

Peptides

Aprataxin and PNK-like factor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Aprataxin and PNK-like factor

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