SMTL ID : 2l8m.1

Reduced and CO-bound cytochrome P450cam (CYP101A1)

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x CAM: CAMPHOR(Non-covalent)

CAM.1: 17 residues within 4Å: Chain A: P.87, F.88, Y.97, F.99, T.102, T.186, L.245, V.248, T.253, V.296, D.298, R.300, Q.323, I.396, V.397 Ligands: HEM.2, CMO.3 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:T.102, A:V.248, A:V.296, A:I.396, A:V.397 Hydrogen bonds: A:Y.97

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.2: 34 residues within 4Å: Chain A: P.101, T.102, R.113, A.116, V.120, F.164, L.245, L.246, G.249, G.250, T.253, V.254, F.257, L.290, L.295, V.296, D.298, R.300, Q.323, T.349, T.350, F.351, G.352, H.356, L.357, C.358, L.359, G.360, Q.361, L.363, A.364, I.368 Ligands: CAM.1, CMO.3 17 PLIP interactions: 16 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:T.102, A:V.120, A:L.245, A:L.245, A:F.257, A:L.295, A:T.350 Hydrogen bonds: A:L.357, A:L.357 Water bridges: A:R.113, A:R.300 Salt bridges: A:R.113, A:R.300, A:H.356, A:H.356 Metal complexes: A:C.358, CMO.3

1 x CMO: CARBON MONOXIDE(Non-functional Binders)

CMO.3: 5 residues within 4Å: Chain A: L.245, G.249, T.253 Ligands: CAM.1, HEM.2 No protein-ligand interaction detected (PLIP)

4 x K: POTASSIUM ION(Non-covalent)

K.4: 1 residues within 4Å: Chain A: D.154 No protein-ligand interaction detected (PLIP) K.5: 3 residues within 4Å: Chain A: Q.47, E.48, R.68 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:Q.47, H2O.56, H2O.57 K.6: 2 residues within 4Å: Chain A: E.77, D.78 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.77 K.7: 2 residues within 4Å: Chain A: E.153, E.157 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.157, A:E.157, H2O.23

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.8: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.9: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.10: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Asciutto, E.K. et al., Experimentally Restrained Molecular Dynamics Simulations for Characterizing the Open States of Cytochrome P450(cam). Biochemistry (2011)

Release Date

2011-02-16

Peptides

Camphor 5-monooxygenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Camphor 5-monooxygenase

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