SMTL ID : 2lhb.1

REFINEMENT OF A MOLECULAR MODEL FOR LAMPREY HEMOGLOBIN FROM PETROMYZON MARINUS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x CYN: CYANIDE ION(Non-covalent)

CYN.1: 6 residues within 4Å: Chain A: F.52, H.73, I.77, H.105, L.119 Ligands: HEM.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.73

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.2: 22 residues within 4Å: Chain A: F.41, F.51, F.52, H.73, R.76, I.77, A.80, V.81, L.101, K.104, H.105, F.109, V.111, D.112, Y.115, F.116, L.119, A.120, I.123, I.141, L.145 Ligands: CYN.1 17 PLIP interactions: 17 interactions with chain A, Hydrophobic interactions: A:F.52, A:F.52, A:A.80, A:L.101, A:F.109, A:F.109, A:F.109, A:F.109, A:F.116, A:L.119, A:L.145 Water bridges: A:K.54, A:K.54, A:H.73 Salt bridges: A:K.104 pi-Cation interactions: A:H.105 Metal complexes: A:H.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Honzatko, R.B. et al., Refinement of a molecular model for lamprey hemoglobin from Petromyzon marinus. J.Mol.Biol. (1985)

Release Date

1986-01-21

Peptides

HEMOGLOBIN V (CYANO MET): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

HEMOGLOBIN V (CYANO MET)

Related Entries With Identical Sequence