SMTL ID : 2lwi.1

Solution structure of H-RasT35S mutant protein in complex with Kobe2601

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)

GNP.1: 16 residues within 4Å: Chain A: G.18, G.19, G.21, S.23, A.24, F.34, V.35, Y.38, N.122, K.123, D.125, L.126, S.151, A.152, K.153 Ligands: MG.2 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:S.23, A:N.122, A:K.123, A:K.123, A:A.152, A:K.153 Water bridges: A:A.24 Salt bridges: A:D.125 pi-Cation interactions: A:K.123

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: S.23, V.35 Ligands: GNP.1 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:S.23, H2O.1, H2O.1, H2O.1

1 x KOB: 2-(2,4-dinitrophenyl)-N-(4-fluorophenyl)hydrazinecarbothioamide(Non-covalent)

KOB.3: 8 residues within 4Å: Chain A: K.11, E.43, L.62, A.72, M.73, Q.76, Y.77, T.80 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Q.76, A:Y.77 Hydrogen bonds: A:Q.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shima, F. et al., In silico discovery of small-molecule Ras inhibitors that display antitumor activity by blocking the Ras-effector interaction. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2013-05-22

Peptides

GTPase HRas: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GTPase HRas

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