SMTL ID : 2lyb.1

Structure of HIV-1 myr(-) matrix protein in complex with 1,2-dioctanoyl-sn-phosphatidyl-L-serine

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x 8SP: O-[(R)-{[(2R)-2,3-bis(octanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine(Non-covalent)

8SP.1: 11 residues within 4Å: Chain A: L.40, F.43, V.45, I.59, Q.62, L.63, S.66, T.69, L.74, L.77, I.81 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.40, A:F.43, A:F.43, A:I.59, A:Q.62, A:L.63, A:L.63, A:L.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vlach, J. et al., Trio engagement via plasma membrane phospholipids and the myristoyl moiety governs HIV-1 matrix binding to bilayers. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2013-02-13

Peptides

Matrix protein p17: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Matrix protein p17

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