SMTL ID : 2mev.2 (3 other biounits)

STRUCTURAL REFINEMENT AND ANALYSIS OF MENGO VIRUS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-5-5-5-5-mer

Ligands

5 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 7 residues within 4Å: Chain A: Y.202 Chain B: N.199, I.200, T.203, S.204, S.205, H.209 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:N.199, B:S.205, B:S.205, A:Y.202 Salt bridges: B:H.209 PO4.2: 7 residues within 4Å: Chain E: Y.202 Chain F: N.199, I.200, T.203, S.204, S.205, H.209 4 PLIP interactions: 4 interactions with chain F Hydrogen bonds: F:N.199, F:S.205, F:S.205 Salt bridges: F:H.209 PO4.3: 7 residues within 4Å: Chain I: Y.202 Chain J: N.199, I.200, T.203, S.204, S.205, H.209 4 PLIP interactions: 4 interactions with chain J Hydrogen bonds: J:N.199, J:S.205, J:S.205 Salt bridges: J:H.209 PO4.4: 7 residues within 4Å: Chain M: Y.202 Chain N: N.199, I.200, T.203, S.204, S.205, H.209 5 PLIP interactions: 4 interactions with chain N, 1 interactions with chain M Hydrogen bonds: N:N.199, N:S.205, N:S.205, M:Y.202 Salt bridges: N:H.209 PO4.5: 7 residues within 4Å: Chain Q: Y.202 Chain R: N.199, I.200, T.203, S.204, S.205, H.209 5 PLIP interactions: 4 interactions with chain R, 1 interactions with chain Q Hydrogen bonds: R:N.199, R:S.205, R:S.205, Q:Y.202 Salt bridges: R:H.209

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Krishnaswamy, S. et al., Structural refinement and analysis of Mengo virus. J.Mol.Biol. (1990)

Release Date

1990-01-15

Peptides

MENGO VIRUS COAT PROTEIN (SUBUNIT VP1): AEIMQ
MENGO VIRUS COAT PROTEIN (SUBUNIT VP2): BFJNR
MENGO VIRUS COAT PROTEIN (SUBUNIT VP3): CGKOS
MENGO VIRUS COAT PROTEIN (SUBUNIT VP4): DHLPT

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

E
1

I
1

M
1

Q
1

B
2

F
2

J
2

N
2

R
2

C
3

G
3

K
3

O
3

S
3

D
4

H
4

L
4

P
4

T
4

MENGO VIRUS COAT PROTEIN (SUBUNIT VP1)

MENGO VIRUS COAT PROTEIN (SUBUNIT VP2)

MENGO VIRUS COAT PROTEIN (SUBUNIT VP3)

MENGO VIRUS COAT PROTEIN (SUBUNIT VP4)

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