SMTL ID : 2mkk.1

Structural model of tandem RRM domains of cytoplasmic polyadenylation element binding protein 1 (CPEB1) in complex with RNA

Coordinates

PDB Format

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x U- U- U- U- A: RNA (5'-R(*UP*UP*UP*UP*A)-3')(Non-covalent)

U-U-U-U-A.1: 33 residues within 4Å: Chain A: K.20, F.22, G.24, G.25, V.26, P.27, W.28, E.48, P.50, D.53, K.62, G.63, Y.64, Y.66, Y.96, M.104, K.107, Q.110, I.112, F.136, L.140, H.141, G.142, M.143, D.168, K.169, I.174, G.175, S.176, K.205, D.210, P.211, Y.212 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Afroz, T. et al., A fly trap mechanism provides sequence-specific RNA recognition by CPEB proteins. Genes Dev. (2014)

Release Date

2014-07-23

Peptides

Cytoplasmic polyadenylation element-binding protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytoplasmic polyadenylation element-binding protein 1