SMTL ID : 2mpa.1

BACTERICIDAL ANTIBODY AGAINST NEISSERIA MENINGITIDIS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x THC- LYS- ASP- THR- ASN- ASN- ASN- LEU- CYF: CONJUGATE OF PORA P1.16 PEPTIDE WITH FLUORESCEIN(Non-covalent)

THC-LYS-ASP-THR-ASN-ASN-ASN-LEU-CYF.1: 18 residues within 4Å: Chain A: H.31, S.32, N.33, Y.37, S.96, H.98, V.99, R.101 Chain B: S.31, Y.32, W.33, H.35, W.47, R.59, I.98, I.99, Y.100, D.102 19 PLIP interactions: 12 interactions with chain B, 7 interactions with chain A Hydrophobic interactions: B:W.47, B:Y.100, A:Y.37, A:V.99 Hydrogen bonds: B:S.31, B:W.33, B:W.33, B:R.59, B:R.59, B:D.102, B:D.102, A:N.33, A:S.96, A:H.98 Salt bridges: B:R.59, A:H.31 pi-Cation interactions: B:R.59, B:R.59 Water bridges: A:V.99

1 x CD: CADMIUM ION(Non-covalent)

CD.2: 1 residues within 4Å: Chain A: H.98 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.98, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

van den Elsen, J.M. et al., Bactericidal antibody recognition of a PorA epitope of Neisseria meningitidis: crystal structure of a Fab fragment in complex with a fluorescein-conjugated peptide. Proteins (1997)

Release Date

1999-06-23

Peptides

MN12H2 IGG2A-KAPPA, light chain: A
MN12H2 IGG2A-KAPPA,heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

MN12H2 IGG2A-KAPPA, light chain

MN12H2 IGG2A-KAPPA,heavy chain

Related Entries With Identical Sequence