SMTL ID : 2naa.1

NSD1-PHD_5-C5HCH tandem domain structure

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

monomer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.9, S.11, C.12, H.31, C.34 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.9, A:C.12, A:H.31, A:C.34 ZN.2: 5 residues within 4Å: Chain A: C.21, K.23, C.26, C.47, H.50 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.21, A:C.26, A:C.47, A:H.50 ZN.3: 5 residues within 4Å: Chain A: C.52, V.54, C.55, C.71, H.74 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.52, A:C.55, A:C.71, A:H.74 ZN.4: 6 residues within 4Å: Chain A: C.63, M.65, C.66, S.68, C.90, H.93 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.63, A:C.66, A:C.90, A:H.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Berardi, A. et al., Structural basis for PHDVC5HCHNSD1-C2HRNizp1 interaction: implications for Sotos syndrome. Nucleic Acids Res. (2016)

Release Date

2016-03-09

Peptides

Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific