SMTL ID : 2nlp.9 (8 other biounits)

Human beta-defensin-1 (Mutant Gln24Glu)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-trimer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: Y.3 Chain B: D.1, H.2, C.27, Y.28, R.29 12 PLIP interactions: 11 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:H.2, B:Y.28, B:R.29 Water bridges: B:D.1, B:D.1, B:H.2, B:C.27, B:R.29, B:R.29, B:G.30, A:Y.3 Salt bridges: B:R.29 SO4.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) SO4.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) SO4.4: 3 residues within 4Å: Chain A: D.1, G.25, T.26 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.1, A:T.26 Water bridges: A:T.26, A:T.26 SO4.5: 5 residues within 4Å: Chain B: D.1, G.25, T.26 Chain C: D.1, N.4 10 PLIP interactions: 5 interactions with chain B, 5 interactions with chain C Hydrogen bonds: B:D.1, B:D.1, B:T.26, B:T.26, C:D.1, C:D.1, C:D.1, C:N.4 Water bridges: B:N.4, C:T.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pazgier, M. et al., Studies of the Biological Properties of Human beta-Defensin 1. J.Biol.Chem. (2007)

Release Date

2006-10-31

Peptides

Beta-defensin 1: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Beta-defensin 1

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