SMTL ID : 2nw0.2 (1 other biounit)

Crystal structure of a lysin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

4 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 8 residues within 4Å: Chain A: D.5, Y.57, D.89, E.91, Y.120, W.140, Q.156, D.170 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:Y.57, A:Y.120, A:W.140 Hydrogen bonds: A:D.89, A:Q.156 Water bridges: A:Y.57, A:Y.57 ACT.2: 3 residues within 4Å: Chain A: S.179, L.180, D.181 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.180, A:D.181 ACT.3: 2 residues within 4Å: Chain A: G.176, D.177 No protein-ligand interaction detected (PLIP) ACT.4: 4 residues within 4Å: Chain A: H.123, P.142, R.143, Y.144 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:H.123, A:P.142, A:Y.144 Hydrogen bonds: A:Y.144 Salt bridges: A:H.123

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Porter, C.J. et al., The 1.6 A Crystal Structure of the Catalytic Domain of PlyB, a Bacteriophage Lysin Active Against Bacillus anthracis. J.Mol.Biol. (2007)

Release Date

2006-12-05

Peptides

PlyB: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

PlyB

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