SMTL ID : 2o0w.1

Pectate lyase bound to hexasaccharide compound IV

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

3 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.184, D.223, G.224, D.227 Ligands: CA.3 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.184, A:D.223, A:D.227, H2O.2, H2O.17 CA.2: 2 residues within 4Å: Chain A: D.173, N.180 5 PLIP interactions: 5 Ligand-Water interactions Metal complexes: H2O.6, H2O.6, H2O.18, H2O.19, H2O.20 CA.3: 2 residues within 4Å: Chain A: D.223 Ligands: CA.1 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.223, H2O.4, H2O.10, H2O.17, H2O.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Seyedarabi, A. et al., Structural and thermodynamic insights into the mechanism of pectate lyase. To be Published

Release Date

2007-11-20

Peptides

Pectate lyase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Pectate lyase

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