SMTL ID : 2o26.2 (1 other biounit)

Structure of a class III RTK signaling assembly

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-2-2-mer

Ligands

2 x NAG- NAG- FUL: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-FUL.1: 3 residues within 4Å: Chain C: Y.270, N.272, N.273 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:Y.270 NAG-NAG-FUL.3: 4 residues within 4Å: Chain D: M.222, Y.270, N.272, N.273 No protein-ligand interaction detected (PLIP)

2 x NAG- NAG- MAN: alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-MAN.2: 2 residues within 4Å: Chain C: M.268, N.279 No protein-ligand interaction detected (PLIP) NAG-NAG-MAN.4: 2 residues within 4Å: Chain D: M.268, N.279 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, H. et al., Structural basis for stem cell factor-KIT signaling and activation of class III receptor tyrosine kinases. Embo J. (2007)

Release Date

2007-03-13

Peptides

Kit ligand: AB
Mast/stem cell growth factor receptor: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
U

D
W

Kit ligand

Mast/stem cell growth factor receptor

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