SMTL ID : 2o2l.2 (1 other biounit)

Crystal structure of human heat-labile enterotoxin in complex with a blood group A antigen analog

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.53 Å

Oligo State

homo-pentamer

Ligands

5 x BGC- GAL- FUC- A2G- FUC: alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]beta-D-glucopyranose

BGC-GAL-FUC-A2G-FUC.1: 9 residues within 4Å: Chain A: Y.18, G.45, A.46, T.47, F.48, T.92, P.93, N.94 Chain E: Q.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.45, A:T.47, A:T.47, A:Y.18, A:G.45 Water bridges: A:N.94 Hydrophobic interactions: A:Y.18 BGC-GAL-FUC-A2G-FUC.2: 11 residues within 4Å: Chain A: Q.3 Chain B: Y.18, T.41, S.44, G.45, A.46, T.47, F.48, T.92, P.93, N.94 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Water bridges: A:Q.3, B:Q.16, B:Q.16 Hydrogen bonds: B:G.45, B:T.47, B:T.47, B:Y.18, B:G.45 Hydrophobic interactions: B:A.46 BGC-GAL-FUC-A2G-FUC.3: 9 residues within 4Å: Chain B: Q.3 Chain C: Y.18, S.44, G.45, A.46, T.47, F.48, P.93, N.94 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain C Water bridges: B:Q.3, B:E.7 Hydrogen bonds: C:G.45, C:T.47, C:T.47, C:Y.18, C:G.45 Hydrophobic interactions: C:A.46 BGC-GAL-FUC-A2G-FUC.4: 11 residues within 4Å: Chain C: Q.3 Chain D: Q.16, Y.18, T.41, S.44, G.45, A.46, T.47, F.48, P.93, N.94 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:G.45, D:T.47, D:T.47, D:Q.16, D:Y.18, D:G.45 Water bridges: D:T.41, D:N.94, D:S.44, D:S.44, D:S.44 Hydrophobic interactions: D:A.46 BGC-GAL-FUC-A2G-FUC.5: 9 residues within 4Å: Chain D: Q.3 Chain E: Y.18, G.45, A.46, T.47, F.48, T.92, P.93, N.94 2 PLIP interactions: 1 interactions with chain D, 1 interactions with chain E Hydrogen bonds: D:Q.3, E:G.45, E:T.47, E:T.47, E:G.45 Hydrophobic interactions: E:A.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Holmner, A. et al., Blood Group Antigen Recognition by Escherichia coli Heat-labile Enterotoxin. J.Mol.Biol. (2007)

Release Date

2007-08-14

Peptides

Heat-labile enterotoxin B chain: ABCDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
I

B
J

C
K

D
L

E
M

Heat-labile enterotoxin B chain

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