SMTL ID : 2o3f.3 (2 other biounits)

Structural Genomics, the crystal structure of the N-terminal domain of the putative transcriptional regulator ybbH from Bacillus subtilis subsp. subtilis str. 168.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: A.32, H.33, P.34, H.35, K.36 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.35 Salt bridges: A:H.33, A:H.35 SO4.2: 5 residues within 4Å: Chain A: S.52, A.54, A.55, R.58 Ligands: SO4.4 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.22, A:S.22, A:S.52 Salt bridges: A:R.58 SO4.3: 3 residues within 4Å: Chain A: Q.13, K.16, H.17 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.13 Salt bridges: A:H.17 SO4.4: 5 residues within 4Å: Chain A: P.20, P.21, S.22, R.58 Ligands: SO4.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.22, A:R.58 SO4.5: 4 residues within 4Å: Chain A: I.57, G.67, F.68, Q.69 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:F.68, A:Q.69 Water bridges: A:K.66, A:D.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tan, K. et al., The crystal structure of the N-terminal domain of the putative transcriptional regulator ybbH from Bacillus subtilis subsp. subtilis str. 168. To be Published

Release Date

2007-01-02

Peptides

Putative HTH-type transcriptional regulator ybbH: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Putative HTH-type transcriptional regulator ybbH

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