SMTL ID : 2o3p.1

Crystal structure of Pim1 with Quercetin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.24 Å

Oligo State

monomer

Ligands

2 x IMD: IMIDAZOLE(Non-covalent)

IMD.1: 7 residues within 4Å: Chain A: F.102, I.105, T.106, D.142, D.206, G.210, D.211 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.106, A:D.206 pi-Stacking: A:F.102 IMD.2: 6 residues within 4Å: Chain A: F.21, D.100, E.143, N.144, I.157 Ligands: QUE.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.100

1 x QUE: 3,5,7,3',4'-PENTAHYDROXYFLAVONE(Non-covalent)

QUE.3: 15 residues within 4Å: Chain A: L.16, F.21, V.24, A.37, K.39, I.76, L.92, E.93, R.94, P.95, V.98, L.146, I.157, D.158 Ligands: IMD.2 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.24, A:L.92, A:V.98, A:L.146, A:I.157, A:I.157, A:I.157 Hydrogen bonds: A:K.39, A:E.93, A:P.95, A:D.158 Water bridges: A:R.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Holder, S. et al., Characterization of a potent and selective small-molecule inhibitor of the PIM1 kinase. Mol.Cancer Ther. (2007)

Release Date

2007-02-13

Peptides

Proto-oncogene serine/threonine-protein kinase Pim-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Proto-oncogene serine/threonine-protein kinase Pim-1

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