SMTL ID : 2o7c.1

Crystal structure of L-methionine-lyase from Pseudomonas

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-tetramer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: Y.114, K.211, V.339, S.340, Q.349, R.375 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.340, A:Q.349 Water bridges: A:Y.114, A:R.375, A:R.375 Salt bridges: A:R.375 SO4.2: 6 residues within 4Å: Chain B: Y.114, K.211, V.339, S.340, Q.349, R.375 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:S.340 Water bridges: B:Y.189, B:R.375, B:R.375 Salt bridges: B:R.375 SO4.3: 5 residues within 4Å: Chain C: Y.114, V.339, S.340, Q.349, R.375 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:S.340, C:Q.349 Water bridges: C:Y.114, C:Y.189 Salt bridges: C:R.375 SO4.4: 6 residues within 4Å: Chain D: Y.114, K.211, V.339, S.340, Q.349, R.375 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:S.340 Salt bridges: D:R.375

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kudou, D. et al., Structure of the antitumour enzyme L-methionine gamma-lyase from Pseudomonas putida at 1.8 A resolution. J.Biochem.(Tokyo) (2007)

Release Date

2007-12-11

Peptides

Methionine gamma-lyase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Methionine gamma-lyase

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