SMTL ID : 2o8w.1

Crystal Structure and Binding Epitopes of Urokinase-type Plasminogen Activator (C122A/N145Q/S195A) in complex with Inhibitors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.86 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: H.46, Q.195, G.196, D.197, A.198 Ligands: PL0.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.196, A:A.198 Salt bridges: A:H.46

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.2: 3 residues within 4Å: Chain A: S.134, E.136, S.205 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.134

1 x PL0: 1-phenylguanidine(Non-covalent)

PL0.3: 14 residues within 4Å: Chain A: D.192, S.193, C.194, Q.195, V.216, S.217, W.218, G.219, G.221, C.222, K.227, P.228, G.229 Ligands: SO4.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.216 Hydrogen bonds: A:S.193, A:S.193, A:G.221 Water bridges: A:D.192 Salt bridges: A:D.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, G. et al., Crystal Structure and Binding Epitopes of Urokinase-type Plasminogen Activator (C122A/N145Q/S195A) in complex with Inhibitors. To be Published

Release Date

2007-12-25

Peptides

Urokinase plasminogen activator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Urokinase plasminogen activator

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