SMTL ID : 2oai.1

The structure of transporter associated domain CorC_HlyC from a Xylella fastidiosa Temecula1 hemolysin.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 8 residues within 4Å: Chain A: D.79, D.81, D.86 Chain B: D.79, D.81, D.86 Ligands: CA.5, CA.6 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain A Metal complexes: B:D.79, B:D.81, B:D.81, B:D.86, A:D.79 CA.2: 5 residues within 4Å: Chain A: D.79, L.80, D.81 Chain B: D.86 Ligands: CA.5 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.79, A:L.80, A:D.81, H2O.4, H2O.4 CA.5: 8 residues within 4Å: Chain A: D.79, D.81, D.86 Chain B: D.79, D.81, D.86 Ligands: CA.1, CA.2 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Metal complexes: A:D.79, A:D.81, A:D.81, A:D.86, B:D.79 CA.6: 5 residues within 4Å: Chain A: D.86 Chain B: D.79, L.80, D.81 Ligands: CA.1 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.79, B:L.80, B:D.81, H2O.1, H2O.1

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 7 residues within 4Å: Chain A: R.15, D.17, L.89, Q.91 Chain B: R.15, Q.91 Ligands: EDO.7 7 PLIP interactions: 3 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:R.15, B:R.15, B:Q.91, A:R.15, A:R.15, A:Q.91 Water bridges: A:S.19 EDO.4: 7 residues within 4Å: Chain A: D.23, G.24, T.25, A.51, R.84, I.85, D.86 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.86 Water bridges: A:I.85 EDO.7: 7 residues within 4Å: Chain A: R.15, Q.91 Chain B: R.15, D.17, L.89, Q.91 Ligands: EDO.3 7 PLIP interactions: 4 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:R.15, B:R.15, B:Q.91, A:R.15, A:R.15, A:Q.91 Water bridges: B:S.19 EDO.8: 7 residues within 4Å: Chain B: D.23, G.24, T.25, A.51, R.84, I.85, D.86 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.86 Water bridges: B:I.85

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cuff, M.E. et al., The structure of transporter associated domain CorC_HlyC from a Xylella fastidiosa Temecula1 hemolysin. TO BE PUBLISHED

Release Date

2007-01-16

Peptides

Hemolysin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Hemolysin

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