SMTL ID : 2oc6.1 (1 other biounit)

Crystal structure of a protein from the duf1801 family (ydhg, bsu05750) from bacillus subtilis at 1.75 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: G.1, L.35, H.36, T.37 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.1, A:T.37 Water bridges: A:L.35 Salt bridges: A:H.36 SO4.2: 3 residues within 4Å: Chain A: T.120, F.121, W.122 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:F.121, A:W.122 Water bridges: A:T.120, A:T.120

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 4 residues within 4Å: Chain A: F.16, H.17, W.95, N.96 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:N.96 Water bridges: A:W.95 Salt bridges: A:H.17 ACT.4: 4 residues within 4Å: Chain A: S.59, K.60, K.61, H.62 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:K.61 Hydrogen bonds: A:S.59, A:K.61 Salt bridges: A:H.62

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 4 residues within 4Å: Chain A: Y.8, G.11, I.12, V.58 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.8 GOL.6: 1 residues within 4Å: Chain A: W.41 No protein-ligand interaction detected (PLIP) GOL.7: 3 residues within 4Å: Chain A: E.23, W.27, Y.101 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.23 Water bridges: A:E.23

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of hypothetical protein (NP_388456.1) from Bacillus subtilis at 1.75 A resolution. To be published

Release Date

2007-01-16

Peptides

YdhG protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

YdhG protein

Related Entries With Identical Sequence