SMTL ID : 2oel.1

Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with Mg2+ and HCO3- ions

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x CO3: CARBONATE ION(Non-functional Binders)

CO3.1: 6 residues within 4Å: Chain A: A.336, G.337, I.338, A.358, G.360, G.361 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.336, A:I.338, A:A.358 CO3.3: 7 residues within 4Å: Chain B: A.336, G.337, I.338, A.358, G.359, G.360, G.361 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:A.336, B:G.337, B:I.338, B:A.358

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: K.173, D.175, E.176 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.175, A:E.176, H2O.2, H2O.2, H2O.3 MG.4: 3 residues within 4Å: Chain B: K.173, D.175, E.176 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.175, B:E.176, H2O.13, H2O.14, H2O.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Imker, H.J. et al., Mechanistic Diversity in the RuBisCO Superfamily: The "Enolase" in the Methionine Salvage Pathway in Geobacillus kaustophilus. Biochemistry (2007)

Release Date

2007-03-20

Peptides

2,3-diketo-5-methylthiopentyl-1-phosphate enolase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

2,3-diketo-5-methylthiopentyl-1-phosphate enolase

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