SMTL ID : 2og7.1

Cystal structure of asparagine oxygenase in complex with Fe(II), 2S,3S-3-hydroxyasparagine and succinate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

monomer

Ligands

1 x FE2: FE (II) ION(Non-covalent)

FE2.1: 5 residues within 4Å: Chain A: H.179, E.181, H.311 Ligands: SIN.2, AHB.3 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.179, A:E.181, A:H.311

1 x SIN: SUCCINIC ACID(Non-covalent)

SIN.2: 12 residues within 4Å: Chain A: V.158, L.176, H.179, E.181, L.207, H.311, R.313, R.325, L.327, R.329 Ligands: FE2.1, AHB.3 8 PLIP interactions: 8 interactions with chain A Water bridges: A:R.313, A:R.329, A:R.329 Salt bridges: A:H.179, A:H.311, A:R.313, A:R.325, A:R.329

1 x AHB: BETA-HYDROXYASPARAGINE(Non-covalent)

AHB.3: 12 residues within 4Å: Chain A: E.149, G.169, N.170, H.179, E.181, N.182, P.237, S.239, D.265, R.329 Ligands: FE2.1, SIN.2 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:E.149, A:N.170, A:N.170, A:E.181, A:N.182, A:N.182, A:S.239, A:D.265, A:R.329, A:R.329 Water bridges: A:Q.168, A:A.183, A:S.239 Salt bridges: A:R.329

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Strieker, M. et al., Mechanistic and structural basis of stereospecific Cbeta-hydroxylation in calcium-dependent antibiotic, a daptomycin-type lipopeptide. Acs Chem.Biol. (2007)

Release Date

2007-03-06

Peptides

asparagine oxygenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

asparagine oxygenase

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