SMTL ID : 2ogz.1

Crystal structure of DPP-IV complexed with Lilly aryl ketone inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x U1N: 4-[(3R)-3-{[2-(4-FLUOROPHENYL)-2-OXOETHYL]AMINO}BUTYL]BENZAMIDE(Non-covalent)

U1N.1: 16 residues within 4Å: Chain A: R.87, E.167, E.168, F.319, Y.509, W.591, S.592, Y.593, G.594, V.618, W.621, Y.624, Y.628, N.672, V.673, H.702 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:E.167, A:F.319, A:Y.509, A:Y.509, A:Y.624, A:Y.628, A:V.673 Hydrogen bonds: A:R.87, A:Y.593, A:G.594, A:N.672 pi-Stacking: A:Y.628 U1N.2: 16 residues within 4Å: Chain B: R.87, E.167, E.168, F.319, Y.509, W.591, S.592, Y.593, G.594, V.618, W.621, Y.624, Y.628, N.672, V.673, H.702 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:F.319, B:Y.509, B:Y.593, B:Y.593, B:V.618, B:Y.624, B:V.673 Hydrogen bonds: B:R.87, B:E.167, B:Y.593, B:G.594, B:Y.624 Water bridges: B:S.592 pi-Stacking: B:Y.628

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sheehan, S.M. et al., Discovery of non-covalent dipeptidyl peptidase IV inhibitors which induce a conformational change in the active site. Bioorg.Med.Chem.Lett. (2007)

Release Date

2007-03-06

Peptides

Dipeptidyl peptidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Dipeptidyl peptidase

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