SMTL ID : 2oi9.1

Structure of the 2C/Ld/QL9 allogeneic complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

hetero-oligomer

Ligands

1 x GLN- LEU- SER- PRO- PHE- PRO- PHE- ASP- LEU: peptide (GLN)(LEU)(SER)(PRO)(PHE)(PRO)(PHE)(ASP)(LEU)(Non-covalent)

GLN-LEU-SER-PRO-PHE-PRO-PHE-ASP-LEU.1: 36 residues within 4Å: Chain A: Y.7, Y.45, Y.59, R.62, I.63, V.66, G.69, Q.70, W.73, N.77, L.81, Y.84, L.95, R.97, Y.99, T.143, K.146, W.147, A.150, A.152, Y.155, Y.156, Y.159, E.163, W.167, Y.171 Chain B: Y.31, A.96 Chain C: H.29, N.30, N.31, Y.50, G.94, G.95, G.96, G.97 35 PLIP interactions: 7 interactions with chain C, 26 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: C:Y.50, C:Y.50, A:Y.7, A:Y.45, A:V.66, A:W.73, A:W.73, A:W.73, A:W.73, A:N.77, A:L.81, A:L.95, A:W.147, A:A.150, A:A.152, A:Y.155, A:Y.155, A:W.167, B:Y.31 Hydrogen bonds: C:N.30, C:N.31, C:G.95, A:N.77, A:R.97, A:R.97, A:Y.99, A:K.146, A:Y.155, A:Y.156, A:E.163, A:Y.171, B:S.97 Water bridges: C:N.30, C:N.30, A:Y.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Colf, L.A. et al., How a single T cell receptor recognizes both self and foreign MHC. Cell(Cambridge,Mass.) (2007)

Release Date

2007-04-24

Peptides

Major Histocompatibility Complex protein: A
T cell receptor alpha chain: B
T cell receptor beta chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Major Histocompatibility Complex protein

T cell receptor alpha chain

T cell receptor beta chain

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