SMTL ID : 2okg.1 (1 other biounit)

Structure of effector binding domain of central glycolytic gene regulator (CggR) from B. subtilis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 2 residues within 4Å: Chain A: R.117, L.118 Ligand excluded by PLIP CL.2: 5 residues within 4Å: Chain A: G.65, T.66, T.67, I.68, G.155 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: G.30, D.31, S.35 Chain B: R.44 Ligand excluded by PLIP

1 x G3H: GLYCERALDEHYDE-3-PHOSPHATE(Non-covalent)

G3H.4: 13 residues within 4Å: Chain B: G.64, G.65, T.66, T.67, G.155, I.156, G.157, M.162, R.165, R.166, E.184, F.186, K.225 13 PLIP interactions: 13 interactions with chain B Hydrogen bonds: B:G.64, B:T.66, B:T.67, B:T.67, B:R.165, B:R.166, B:F.186 Water bridges: B:K.39, B:I.156, B:K.225 Salt bridges: B:K.39, B:R.165, B:K.225

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rezacova, P. et al., Crystal structures of the effector-binding domain of repressor Central glycolytic gene Regulator from Bacillus subtilis reveal ligand-induced structural changes upon binding of several glycolytic intermediates. Mol.Microbiol. (2008)

Release Date

2007-01-30

Peptides

Central glycolytic gene regulator: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Central glycolytic gene regulator

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