SMTL ID : 2olt.1 (2 other biounits)

Crystal structure of a phou-like protein (so_3770) from shewanella oneidensis mr-1 at 2.00 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-hexamer

Ligands

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: R.106, F.198 Chain E: Y.200 Ligand excluded by PLIP CL.3: 3 residues within 4Å: Chain B: R.106, F.198 Chain D: Y.200 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain A: Y.200 Chain C: R.106, F.198 Ligand excluded by PLIP CL.8: 3 residues within 4Å: Chain D: R.106, F.198 Chain F: Y.200 Ligand excluded by PLIP CL.11: 3 residues within 4Å: Chain C: Y.200 Chain E: R.106, F.198 Ligand excluded by PLIP CL.13: 3 residues within 4Å: Chain B: Y.200 Chain F: R.106, F.198 Ligand excluded by PLIP

9 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: R.181, Y.200 Chain C: G.105, R.106, G.109, R.110 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:R.106, C:G.109, C:R.110 GOL.4: 5 residues within 4Å: Chain B: R.106, G.109, R.110 Chain D: R.181, Y.200 5 PLIP interactions: 2 interactions with chain D, 3 interactions with chain B Hydrogen bonds: D:Y.200, D:Y.200, B:R.106, B:R.106, B:R.110 GOL.5: 5 residues within 4Å: Chain B: K.99, D.102, R.106, W.205 Chain D: R.181 5 PLIP interactions: 2 interactions with chain D, 3 interactions with chain B Hydrogen bonds: D:R.181, D:R.181, B:K.99, B:R.106, B:R.106 GOL.7: 6 residues within 4Å: Chain C: R.181, Y.200 Chain E: G.105, R.106, G.109, R.110 3 PLIP interactions: 3 interactions with chain E Hydrogen bonds: E:R.106, E:G.109, E:R.110 GOL.9: 5 residues within 4Å: Chain D: R.106, G.109, R.110 Chain F: R.181, Y.200 5 PLIP interactions: 3 interactions with chain D, 2 interactions with chain F Hydrogen bonds: D:R.106, D:R.106, D:R.110, F:Y.200, F:Y.200 GOL.10: 5 residues within 4Å: Chain D: K.99, D.102, R.106, W.205 Chain F: R.181 5 PLIP interactions: 2 interactions with chain F, 3 interactions with chain D Hydrogen bonds: F:R.181, F:R.181, D:K.99, D:R.106, D:R.106 GOL.12: 6 residues within 4Å: Chain A: G.105, R.106, G.109, R.110 Chain E: R.181, Y.200 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.106, A:G.109, A:R.110 GOL.14: 5 residues within 4Å: Chain B: R.181, Y.200 Chain F: R.106, G.109, R.110 5 PLIP interactions: 3 interactions with chain F, 2 interactions with chain B Hydrogen bonds: F:R.106, F:R.106, F:R.110, B:Y.200, B:Y.200 GOL.15: 5 residues within 4Å: Chain B: R.181 Chain F: K.99, D.102, R.106, W.205 5 PLIP interactions: 3 interactions with chain F, 2 interactions with chain B Hydrogen bonds: F:K.99, F:R.106, F:R.106, B:R.181, B:R.181

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of NP_719307.1 from Shewanella oneidensis at 2.00 A resolution. To be published

Release Date

2007-02-06

Peptides

Hypothetical protein: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
B

D
C

E
B

F
C

Hypothetical protein

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