SMTL ID : 2oml.1

crystal structure of E. coli pseudouridine synthase RluE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: Q.25, F.26, T.27, Y.45, R.49 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:F.26, A:T.27, A:R.49 Water bridges: A:Q.25 SO4.2: 5 residues within 4Å: Chain A: R.49, L.50, D.51, S.54, Y.81 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:R.49, A:D.51, A:S.54 Water bridges: A:D.51, A:S.54, A:Y.81, A:R.150, A:R.150, A:Q.151, A:Q.151, A:Q.151, A:V.152 SO4.3: 3 residues within 4Å: Chain A: L.103, N.104, R.154 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.104 Water bridges: A:T.102 Salt bridges: A:R.154 SO4.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) SO4.5: 3 residues within 4Å: Chain A: Q.91, R.98, E.114 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Q.91 Water bridges: A:R.98, A:R.98, A:E.114, A:E.114 Salt bridges: A:R.98 SO4.6: 6 residues within 4Å: Chain A: Y.20, D.53, R.125, R.130, R.153, L.164 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.20 Water bridges: A:R.125, A:R.125 Salt bridges: A:R.125, A:R.130, A:R.153

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pan, H. et al., The Crystal Structure of E. coli rRNA Pseudouridine Synthase RluE. J.Mol.Biol. (2007)

Release Date

2007-03-13

Peptides

Ribosomal large subunit pseudouridine synthase E: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribosomal large subunit pseudouridine synthase E