SMTL ID : 2ozq.2 (1 other biounit)

Crystal Structure of apo-MUP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

4 x CD: CADMIUM ION(Non-covalent)

CD.1: 1 residues within 4Å: Chain A: E.151 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.151, A:E.151, H2O.1 CD.2: 1 residues within 4Å: Chain A: E.25 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.25, A:E.25 CD.8: 1 residues within 4Å: Chain B: E.151 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.151, B:E.151, H2O.9 CD.9: 1 residues within 4Å: Chain B: E.25 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:E.25, B:E.25

10 x NA: SODIUM ION(Non-functional Binders)

NA.3: 1 residues within 4Å: Chain A: E.42 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.42 NA.4: 2 residues within 4Å: Chain A: E.152 Chain B: K.88 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Q.148, A:E.152, B:K.88 Water bridges: A:Q.148, A:E.152 NA.5: 1 residues within 4Å: Chain A: D.137 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.137 NA.6: 4 residues within 4Å: Chain A: T.103, H.116 Chain B: E.152 Ligands: NA.7 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.103, A:H.116 NA.7: 3 residues within 4Å: Chain A: H.153 Ligands: NA.6, NA.14 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Water bridges: B:H.153, A:T.103 Hydrogen bonds: A:H.153 NA.10: 1 residues within 4Å: Chain B: E.42 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.42 NA.11: 2 residues within 4Å: Chain A: K.88 Chain B: E.152 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:Q.148, B:E.152, A:K.88 NA.12: 1 residues within 4Å: Chain B: D.137 No protein-ligand interaction detected (PLIP) NA.13: 4 residues within 4Å: Chain A: E.152 Chain B: T.103, H.116 Ligands: NA.14 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:H.116, A:E.152 NA.14: 3 residues within 4Å: Chain B: H.153 Ligands: NA.7, NA.13 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:H.153 Water bridges: B:H.153

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Syme, N.R. et al., Origin of heat capacity changes in a "nonclassical" hydrophobic interaction. Chembiochem (2007)

Release Date

2008-01-15

Peptides

Novel member of the major urinary protein (Mup) gene family: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Novel member of the major urinary protein (Mup) gene family

Related Entries With Identical Sequence