SMTL ID : 2p06.1

Crystal structure of a predicted coding region AF_0060 from Archaeoglobus fulgidus DSM 4304

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-tetramer

Ligands

4 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: E.68, E.71, E.87, D.90 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.68, A:E.71, A:E.87, A:D.90, H2O.2 MG.3: 4 residues within 4Å: Chain B: E.68, E.71, E.87, D.90 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.68, B:E.71, B:D.90, H2O.4, H2O.5 MG.4: 4 residues within 4Å: Chain C: E.68, E.71, E.87, D.90 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:E.68, C:E.71, C:E.87, C:D.90, H2O.7 MG.6: 4 residues within 4Å: Chain D: E.68, E.71, E.87, D.90 5 PLIP interactions: 3 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:E.68, D:E.71, D:D.90, H2O.8, H2O.10

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: R.51, F.54 Chain B: Y.18, D.23, R.26 6 PLIP interactions: 2 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:R.51, A:R.51, B:D.23, B:R.26, B:R.26 Water bridges: B:Y.18 GOL.5: 5 residues within 4Å: Chain C: R.51, F.54 Chain D: Y.18, D.23, R.26 5 PLIP interactions: 3 interactions with chain D, 2 interactions with chain C Hydrogen bonds: D:D.23, D:R.26, D:R.26, C:R.51, C:R.51

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nocek, B. et al., Crystal structure of a predicted coding region AF_0060 from Archaeoglobus fulgidus DSM 4304. To be Published

Release Date

2007-03-27

Peptides

Hypothetical protein AF_0060: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Hypothetical protein AF_0060