SMTL ID : 2p0e.1

Human nicotinamide riboside kinase 1 in complex with tiazofurin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 6 residues within 4Å: Chain A: N.31, S.32, G.33, K.34, T.35, R.150 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:N.31, A:S.32, A:G.33, A:K.34, A:T.35, A:T.35, A:T.35 Water bridges: A:K.34, A:K.34, A:K.34, A:T.35, A:T.36, A:R.150 Salt bridges: A:K.34, A:R.150

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain A: S.101 Ligand excluded by PLIP

1 x TIZ: (1R)-1-[4-(AMINOCARBONYL)-1,3-THIAZOL-2-YL]-1,4-ANHYDRO-D-RIBITOL(Non-covalent)

TIZ.3: 10 residues within 4Å: Chain A: T.30, D.54, F.57, Y.73, D.74, F.118, R.147, Y.152, Q.153, Y.160 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:T.30, A:D.54, A:Y.73, A:D.74, A:D.74, A:R.147, A:R.147 pi-Stacking: A:Y.73

1 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tempel, W. et al., Nicotinamide Riboside Kinase Structures Reveal New Pathways to NAD(+). Plos Biol. (2007)

Release Date

2007-05-08

Peptides

Nicotinamide riboside kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nicotinamide riboside kinase 1

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