SMTL ID : 2p3z.1

Crystal structure of L-Rhamnonate dehydratase from Salmonella typhimurium

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-octamer

Ligands

8 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: K.191, D.228, E.254, E.282 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.191, A:E.282 Water bridges: A:E.282, A:H.331 NA.2: 4 residues within 4Å: Chain B: K.191, D.228, E.254, E.282 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.191, B:D.228, B:E.254 NA.3: 4 residues within 4Å: Chain C: K.191, D.228, E.254, E.282 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:K.191, C:E.282 Water bridges: C:E.282, C:H.331 NA.4: 4 residues within 4Å: Chain D: K.191, D.228, E.254, E.282 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:K.191, D:E.254, D:E.282 NA.5: 4 residues within 4Å: Chain E: K.191, D.228, E.254, E.282 4 PLIP interactions: 4 interactions with chain E Hydrogen bonds: E:K.191, E:K.191 Water bridges: E:E.282, E:H.331 NA.6: 4 residues within 4Å: Chain F: K.191, D.228, E.254, E.282 3 PLIP interactions: 3 interactions with chain F Hydrogen bonds: F:K.191, F:K.191, F:E.254 NA.7: 4 residues within 4Å: Chain G: K.191, D.228, E.254, E.282 4 PLIP interactions: 4 interactions with chain G Hydrogen bonds: G:K.191, G:E.282 Water bridges: G:E.282, G:H.331 NA.8: 4 residues within 4Å: Chain H: K.191, D.228, E.254, E.282 3 PLIP interactions: 3 interactions with chain H Hydrogen bonds: H:K.191, H:E.254, H:E.254

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Malashkevich, V.N. et al., Crystal Structure of L-Rhamnonate Dehydratase from Salmonella Typhimurium Lt2. To be Published

Release Date

2007-03-20

Peptides

L-rhamnonate dehydratase: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

G
A

H
B

L-rhamnonate dehydratase

Related Entries With Identical Sequence