- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x MET: METHIONINE(Non-covalent)
- 12 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 5 residues within 4Å:- Chain A: N.120, S.123
- Chain D: G.69, V.144, L.145
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.120, A:S.123
GOL.3: 2 residues within 4Å:- Chain A: K.82, D.87
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.82
GOL.4: 5 residues within 4Å:- Chain A: Q.17, V.18, E.21, N.22, R.33
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Q.17, A:N.22, A:R.33
GOL.5: 3 residues within 4Å:- Chain A: D.138, Q.140
- Chain C: E.107
3 PLIP interactions:2 interactions with chain C, 1 interactions with chain A- Hydrogen bonds: C:E.107, C:D.109, A:Q.140
GOL.6: 2 residues within 4Å:- Chain A: Q.5, L.159
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:Q.5
GOL.7: 2 residues within 4Å:- Chain A: N.67, T.117
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.67, A:N.67
GOL.14: 4 residues within 4Å:- Chain C: E.21, H.150, T.151
- Chain D: Q.56
4 PLIP interactions:3 interactions with chain C, 1 interactions with chain D- Hydrogen bonds: C:E.21, C:K.149, C:T.151, D:Q.56
GOL.15: 3 residues within 4Å:- Chain C: E.147, I.148
- Chain D: R.93
2 PLIP interactions:1 interactions with chain D, 1 interactions with chain C- Hydrogen bonds: D:R.93, C:I.148
GOL.21: 6 residues within 4Å:- Chain C: D.138, A.139, Q.140
- Chain E: G.106, E.107, D.109
4 PLIP interactions:2 interactions with chain C, 1 interactions with chain E, 1 Ligand-Ligand interactions- Hydrogen bonds: C:A.139, C:Q.140, E:D.109, M.20
GOL.25: 7 residues within 4Å:- Chain D: S.77, I.78, K.80, R.85, D.109
- Chain F: Q.137, D.138
4 PLIP interactions:1 interactions with chain F, 3 interactions with chain D- Hydrogen bonds: F:D.138, D:K.80, D:K.80, D:R.85
GOL.26: 5 residues within 4Å:- Chain C: N.120, S.123
- Chain F: G.69, V.144, L.145
3 PLIP interactions:1 interactions with chain F, 2 interactions with chain C- Hydrogen bonds: F:G.69, C:S.123, C:S.123
GOL.29: 5 residues within 4Å:- Chain E: D.118, M.119
- Chain H: L.70, D.118, M.119
2 PLIP interactions:2 interactions with chain H- Water bridges: H:D.118, H:N.120
- 9 x CA: CALCIUM ION(Non-covalent)
CA.8: 3 residues within 4Å:- Chain B: D.138, Q.140
- Chain H: E.107
1 PLIP interactions:1 interactions with chain H- Metal complexes: H:E.107
CA.9: 2 residues within 4Å:- Chain B: N.120
- Chain G: G.69
No protein-ligand interaction detected (PLIP)CA.10: 3 residues within 4Å:- Chain B: E.64, G.69
- Chain G: N.120
No protein-ligand interaction detected (PLIP)CA.12: 2 residues within 4Å:- Chain C: G.69
- Chain F: N.120
No protein-ligand interaction detected (PLIP)CA.16: 2 residues within 4Å:- Chain A: G.69
- Chain D: N.120
No protein-ligand interaction detected (PLIP)CA.18: 1 residues within 4Å:- Chain E: G.69
No protein-ligand interaction detected (PLIP)CA.19: 1 residues within 4Å:- Chain E: N.120
No protein-ligand interaction detected (PLIP)CA.22: 2 residues within 4Å:- Chain D: E.107
- Chain F: D.138
3 PLIP interactions:1 interactions with chain F, 1 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: F:D.138, D:E.107, H2O.7
CA.23: 2 residues within 4Å:- Chain F: E.107
- Chain H: D.138
2 PLIP interactions:1 interactions with chain F, 1 Ligand-Water interactions- Metal complexes: F:E.107, H2O.7
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ren, J. et al., The Structure and Transcriptional Analysis of a Global Regulator from Neisseria meningitidis. J.Biol.Chem. (2007)
- Release Date
- 2007-04-03
- Peptides
- Transcriptional regulator, LRP/AsnC family: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
H
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x MET: METHIONINE(Non-covalent)
- 12 x GOL: GLYCEROL(Non-functional Binders)
- 9 x CA: CALCIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ren, J. et al., The Structure and Transcriptional Analysis of a Global Regulator from Neisseria meningitidis. J.Biol.Chem. (2007)
- Release Date
- 2007-04-03
- Peptides
- Transcriptional regulator, LRP/AsnC family: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
H