SMTL ID : 2p6v.1

Structure of TAFH domain of the human TAF4 subunit of TFIID

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-hexamer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 8 residues within 4Å: Chain A: S.73, S.74 Chain B: S.73, S.74 Chain C: S.73, S.74 Ligands: SO4.2, SO4.3 5 PLIP interactions: 2 interactions with chain B, 2 interactions with chain C, 1 interactions with chain A Hydrogen bonds: B:S.74, C:S.74, A:S.74 Water bridges: B:S.74, C:S.74 SO4.2: 8 residues within 4Å: Chain A: S.73, S.74 Chain B: S.73, S.74 Chain C: S.73, S.74 Ligands: SO4.1, SO4.3 5 PLIP interactions: 1 interactions with chain B, 2 interactions with chain C, 2 interactions with chain A Hydrogen bonds: B:S.74, C:S.74, A:S.74 Water bridges: C:S.74, A:S.74 SO4.3: 8 residues within 4Å: Chain A: S.73, S.74 Chain B: S.73, S.74 Chain C: S.73, S.74 Ligands: SO4.1, SO4.2 5 PLIP interactions: 2 interactions with chain B, 1 interactions with chain C, 2 interactions with chain A Hydrogen bonds: B:S.74, C:S.74, A:S.74 Water bridges: B:S.74, A:S.74 SO4.4: 8 residues within 4Å: Chain D: S.73, S.74 Chain E: S.73, S.74 Chain F: S.73, S.74 Ligands: SO4.5, SO4.6 5 PLIP interactions: 2 interactions with chain F, 1 interactions with chain D, 2 interactions with chain E Hydrogen bonds: F:S.74, D:S.74, E:S.74 Water bridges: F:S.74, E:S.74 SO4.5: 8 residues within 4Å: Chain D: S.73, S.74 Chain E: S.73, S.74 Chain F: S.73, S.74 Ligands: SO4.4, SO4.6 5 PLIP interactions: 2 interactions with chain F, 2 interactions with chain D, 1 interactions with chain E Hydrogen bonds: F:S.74, D:S.74, E:S.74 Water bridges: F:S.74, D:S.74 SO4.6: 8 residues within 4Å: Chain D: S.73, S.74 Chain E: S.73, S.74 Chain F: S.73, S.74 Ligands: SO4.4, SO4.5 5 PLIP interactions: 1 interactions with chain F, 2 interactions with chain D, 2 interactions with chain E Hydrogen bonds: F:S.74, D:S.74, E:S.74 Water bridges: D:S.74, E:S.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, X. et al., Conserved region I of human coactivator TAF4 binds to a short hydrophobic motif present in transcriptional regulators. Proc.Natl.Acad.Sci.Usa (2007)

Release Date

2007-05-15

Peptides

Transcription initiation factor TFIID subunit 4: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

Transcription initiation factor TFIID subunit 4