- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x MG: MAGNESIUM ION(Non-covalent)
- 8 x NSK: N-SUCCINYL LYSINE(Non-covalent)
NSK.2: 20 residues within 4Å:- Chain A: F.19, I.21, Y.23, Y.26, D.51, V.136, K.161, K.163, D.191, N.193, E.218, D.243, K.267, S.295, M.296, V.297, E.320, L.321, T.322
- Ligands: MG.1
21 PLIP interactions:21 interactions with chain A- Hydrophobic interactions: A:F.19, A:F.19, A:I.21, A:Y.26, A:V.136, A:V.297
- Hydrogen bonds: A:D.51, A:K.163, A:N.193, A:N.265, A:K.267, A:S.295, A:M.296, A:T.322, A:G.323
- Water bridges: A:K.161, A:E.298, A:E.320
- Salt bridges: A:K.161, A:K.163, A:K.267
NSK.4: 20 residues within 4Å:- Chain B: F.19, I.21, Y.23, Y.26, D.51, V.136, K.161, K.163, D.191, N.193, E.218, D.243, K.267, S.295, M.296, V.297, E.320, L.321, T.322
- Ligands: MG.3
21 PLIP interactions:21 interactions with chain B- Hydrophobic interactions: B:F.19, B:F.19, B:I.21, B:Y.26, B:V.136, B:V.297
- Hydrogen bonds: B:D.51, B:K.163, B:N.193, B:N.265, B:K.267, B:S.295, B:M.296, B:T.322, B:G.323
- Water bridges: B:K.161, B:E.298, B:E.320
- Salt bridges: B:K.161, B:K.163, B:K.267
NSK.6: 20 residues within 4Å:- Chain C: F.19, I.21, Y.23, Y.26, D.51, V.136, K.161, K.163, D.191, N.193, E.218, D.243, K.267, S.295, M.296, V.297, E.320, L.321, T.322
- Ligands: MG.5
21 PLIP interactions:21 interactions with chain C- Hydrophobic interactions: C:F.19, C:F.19, C:I.21, C:Y.26, C:V.136, C:V.297
- Hydrogen bonds: C:D.51, C:K.163, C:N.193, C:N.265, C:K.267, C:S.295, C:M.296, C:T.322, C:G.323
- Water bridges: C:K.161, C:E.298, C:E.320
- Salt bridges: C:K.161, C:K.163, C:K.267
NSK.8: 20 residues within 4Å:- Chain D: F.19, I.21, Y.23, Y.26, D.51, V.136, K.161, K.163, D.191, N.193, E.218, D.243, K.267, S.295, M.296, V.297, E.320, L.321, T.322
- Ligands: MG.7
21 PLIP interactions:21 interactions with chain D- Hydrophobic interactions: D:F.19, D:F.19, D:I.21, D:Y.26, D:V.136, D:V.297
- Hydrogen bonds: D:D.51, D:K.163, D:N.193, D:N.265, D:K.267, D:S.295, D:M.296, D:T.322, D:G.323
- Water bridges: D:K.161, D:E.298, D:E.320
- Salt bridges: D:K.161, D:K.163, D:K.267
NSK.10: 20 residues within 4Å:- Chain E: F.19, I.21, Y.23, Y.26, D.51, V.136, K.161, K.163, D.191, N.193, E.218, D.243, K.267, S.295, M.296, V.297, E.320, L.321, T.322
- Ligands: MG.9
21 PLIP interactions:21 interactions with chain E- Hydrophobic interactions: E:F.19, E:F.19, E:I.21, E:Y.26, E:V.136, E:V.297
- Hydrogen bonds: E:K.163, E:N.193, E:N.265, E:K.267, E:S.295, E:M.296, E:T.322, E:G.323
- Water bridges: E:K.161, E:E.218, E:E.298, E:E.320
- Salt bridges: E:K.161, E:K.163, E:K.267
NSK.12: 20 residues within 4Å:- Chain F: F.19, I.21, Y.23, Y.26, D.51, V.136, K.161, K.163, D.191, N.193, E.218, D.243, K.267, S.295, M.296, V.297, E.320, L.321, T.322
- Ligands: MG.11
21 PLIP interactions:21 interactions with chain F- Hydrophobic interactions: F:F.19, F:F.19, F:I.21, F:Y.26, F:V.136, F:V.297
- Hydrogen bonds: F:K.163, F:N.193, F:N.265, F:K.267, F:S.295, F:M.296, F:T.322, F:G.323
- Water bridges: F:K.161, F:E.218, F:E.298, F:E.320
- Salt bridges: F:K.161, F:K.163, F:K.267
NSK.14: 20 residues within 4Å:- Chain G: F.19, I.21, Y.23, Y.26, D.51, V.136, K.161, K.163, D.191, N.193, E.218, D.243, K.267, S.295, M.296, V.297, E.320, L.321, T.322
- Ligands: MG.13
21 PLIP interactions:21 interactions with chain G- Hydrophobic interactions: G:F.19, G:F.19, G:I.21, G:Y.26, G:V.136, G:V.297
- Hydrogen bonds: G:K.163, G:N.193, G:N.265, G:K.267, G:S.295, G:M.296, G:T.322, G:G.323
- Water bridges: G:K.161, G:E.218, G:E.298, G:E.320
- Salt bridges: G:K.161, G:K.163, G:K.267
NSK.16: 20 residues within 4Å:- Chain H: F.19, I.21, Y.23, Y.26, D.51, V.136, K.161, K.163, D.191, N.193, E.218, D.243, K.267, S.295, M.296, V.297, E.320, L.321, T.322
- Ligands: MG.15
21 PLIP interactions:21 interactions with chain H- Hydrophobic interactions: H:F.19, H:F.19, H:I.21, H:Y.26, H:V.136, H:V.297
- Hydrogen bonds: H:K.163, H:N.193, H:N.265, H:K.267, H:S.295, H:M.296, H:T.322, H:G.323
- Water bridges: H:K.161, H:E.218, H:E.298, H:E.320
- Salt bridges: H:K.161, H:K.163, H:K.267
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Song, L. et al., Prediction and assignment of function for a divergent N-succinyl amino acid racemase. Nat.Chem.Biol. (2007)
- Release Date
- 2007-07-03
- Peptides
- Mandelate racemase/muconate lactonizing enzyme family protein: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x MG: MAGNESIUM ION(Non-covalent)
- 8 x NSK: N-SUCCINYL LYSINE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Song, L. et al., Prediction and assignment of function for a divergent N-succinyl amino acid racemase. Nat.Chem.Biol. (2007)
- Release Date
- 2007-07-03
- Peptides
- Mandelate racemase/muconate lactonizing enzyme family protein: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
A