SMTL ID : 2p8n.1

Ricin a-chain (recombinant) complex with adenine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: F.120, G.121, N.123, R.126 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.121, A:N.123 Salt bridges: A:R.126 SO4.2: 1 residues within 4Å: Chain A: H.66 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:H.66 SO4.3: 4 residues within 4Å: Chain A: N.123, Y.124, D.125 Ligands: ADE.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.124, A:D.125

1 x ADE: ADENINE(Non-covalent)

ADE.4: 11 residues within 4Å: Chain A: A.80, Y.81, V.82, F.94, G.122, N.123, Y.124, I.173, S.177, R.181 Ligands: SO4.3 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:V.82, A:G.122, A:Y.124, A:R.181, A:R.181 Water bridges: A:E.178, A:E.178 pi-Stacking: A:Y.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Carra, J.H. et al., Fragment-based identification of determinants of conformational and spectroscopic change at the ricin active site. BMC Struct.Biol. (2007)

Release Date

2007-11-20

Peptides

Ricin A chain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ricin A chain

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