SMTL ID : 2p9s.1

Structure of bovine Arp2/3 complex co-crystallized with ATP/Mg2+

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.68 Å

Oligo State

hetero-1-1-1-1-1-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: D.11, Q.144 Ligands: ATP.2 No protein-ligand interaction detected (PLIP)

2 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.2: 19 residues within 4Å: Chain A: G.13, T.14, G.15, Y.16, K.18, D.169, G.171, D.172, G.173, G.197, K.225, K.228, E.229, G.323, G.324, S.325, M.327, F.328 Ligands: MG.1 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:T.14, A:T.14, A:G.15, A:Y.16, A:Y.16, A:D.169, A:D.172, A:D.172, A:G.173, A:V.174, A:K.228, A:E.229, A:G.324 Water bridges: A:Y.16, A:T.201, A:K.225, A:E.229 Salt bridges: A:K.18, A:K.18 pi-Stacking: A:F.328 ATP.3: 14 residues within 4Å: Chain B: G.160, D.161, G.162, V.163, G.186, R.187, R.214, K.217, E.218, G.305, G.306, S.307, M.309, Y.310 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:D.158, B:D.161, B:D.161, B:G.162, B:V.163, B:K.217, B:E.218, B:G.306 pi-Stacking: B:Y.310

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nolen, B.J. et al., Insights into the Influence of Nucleotides on Actin Family Proteins from Seven Structures of Arp2/3 Complex. Mol.Cell (2007)

Release Date

2007-05-29

Peptides

Actin-like protein 3: A
Actin-like protein 2: B
Actin-related protein 2/3 complex subunit 1B: C
Actin-related protein 2/3 complex subunit 2: D
Actin-related protein 2/3 complex subunit 3: E
Actin-related protein 2/3 complex subunit 4: F
Actin-related protein 2/3 complex subunit 5: G

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

Actin-like protein 3

Actin-like protein 2

Actin-related protein 2/3 complex subunit 1B

Actin-related protein 2/3 complex subunit 2

Actin-related protein 2/3 complex subunit 3

Actin-related protein 2/3 complex subunit 4

Actin-related protein 2/3 complex subunit 5

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