SMTL ID : 2pfm.1

Crystal Structure of Adenylosuccinate Lyase (PurB) from Bacillus anthracis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-tetramer

Ligands

6 x MLI: MALONATE ION(Non-functional Binders)

MLI.1: 11 residues within 4Å: Chain A: T.151, H.152 Chain B: H.77, S.105, Q.223 Chain D: G.272, S.273, S.274, M.276, K.279, N.281 10 PLIP interactions: 2 interactions with chain B, 5 interactions with chain D, 3 interactions with chain A Hydrogen bonds: B:S.105, D:G.272, D:S.274, D:N.281, A:T.151 Salt bridges: B:H.77, D:K.279, A:H.152, A:H.152 Water bridges: D:A.275 MLI.2: 10 residues within 4Å: Chain A: H.77, S.105, Q.223 Chain B: T.151, H.152 Chain C: G.272, S.273, M.276, K.279, N.281 10 PLIP interactions: 4 interactions with chain C, 3 interactions with chain B, 3 interactions with chain A Hydrogen bonds: C:G.272, C:S.274, C:N.281, B:T.151, A:S.105 Salt bridges: C:K.279, B:H.152, B:H.152, A:H.77 Water bridges: A:S.105 MLI.3: 1 residues within 4Å: Chain A: Q.119 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.119 MLI.4: 11 residues within 4Å: Chain B: G.272, S.273, S.274, M.276, K.279, N.281 Chain C: T.151, H.152 Chain D: H.77, S.105, Q.223 10 PLIP interactions: 5 interactions with chain B, 2 interactions with chain D, 3 interactions with chain C Hydrogen bonds: B:G.272, B:S.274, B:N.281, D:S.105, C:T.151 Water bridges: B:A.275 Salt bridges: B:K.279, D:H.77, C:H.152, C:H.152 MLI.5: 10 residues within 4Å: Chain A: G.272, S.273, M.276, K.279, N.281 Chain C: H.77, S.105, Q.223 Chain D: T.151, H.152 10 PLIP interactions: 3 interactions with chain C, 4 interactions with chain A, 3 interactions with chain D Hydrogen bonds: C:S.105, A:G.272, A:S.274, A:N.281, D:T.151 Water bridges: C:S.105 Salt bridges: C:H.77, A:K.279, D:H.152, D:H.152 MLI.6: 1 residues within 4Å: Chain C: Q.119 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:Q.119, C:E.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Levdikov, V.M. et al., Crystal Structure of Adenylosuccinate Lyase (PurB) from Bacillus anthracis. To be Published

Release Date

2007-04-17

Peptides

Adenylosuccinate lyase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Adenylosuccinate lyase