SMTL ID : 2pg1.3 (2 other biounits)

Structural analysis of a cytoplasmic dynein Light Chain-Intermediate Chain complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-4-4-4-mer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain C: S.16, E.17, R.73 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:E.17 Salt bridges: C:R.73 SO4.2: 5 residues within 4Å: Chain D: R.62, L.80, G.81, Q.82, V.83 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:Q.82, D:V.83 Salt bridges: D:R.62 SO4.3: 5 residues within 4Å: Chain E: T.92, V.93, R.94 Chain G: N.85 Chain L: K.11 4 PLIP interactions: 1 interactions with chain L, 3 interactions with chain E Salt bridges: L:K.11, E:K.20, E:R.94 Hydrogen bonds: E:R.94 SO4.4: 5 residues within 4Å: Chain E: N.85 Chain G: T.92, V.93, R.94 Chain K: K.11 6 PLIP interactions: 1 interactions with chain K, 5 interactions with chain G Salt bridges: K:K.11, G:K.20, G:R.94 Hydrogen bonds: G:T.92, G:R.94 Water bridges: G:R.94 SO4.5: 3 residues within 4Å: Chain J: T.24, Y.25, T.26 2 PLIP interactions: 2 interactions with chain J Hydrogen bonds: J:T.26, J:T.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Williams, J.C. et al., Structural and thermodynamic characterization of a cytoplasmic dynein light chain-intermediate chain complex. Proc.Natl.Acad.Sci.Usa (2007)

Release Date

2007-06-05

Peptides

Dynein light chain 1, cytoplasmic: ABCD
Dynein light chain Tctex-type: EFGH
Cytoplasmic dynein 1 intermediate chain 2: IJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

Dynein light chain 1, cytoplasmic

Dynein light chain Tctex-type

Cytoplasmic dynein 1 intermediate chain 2

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