SMTL ID : 2pgh.1

STRUCTURE DETERMINATION OF AQUOMET PORCINE HEMOGLOBIN AT 2.8 ANGSTROM RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-2-2-mer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 17 residues within 4Å: Chain A: M.32, Y.42, F.43, H.45, H.58, K.61, V.62, A.65, L.83, L.86, H.87, L.91, V.93, N.97, F.98, L.101, L.136 17 PLIP interactions: 17 interactions with chain A, Hydrophobic interactions: A:F.43, A:F.43, A:F.43, A:V.62, A:A.65, A:L.83, A:L.86, A:L.91, A:V.93, A:N.97, A:F.98, A:L.101, A:L.101, A:L.136 Salt bridges: A:H.45 pi-Stacking: A:H.58 Metal complexes: A:H.87 HEM.2: 16 residues within 4Å: Chain B: L.31, T.38, F.41, F.42, H.63, K.66, S.70, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141 14 PLIP interactions: 14 interactions with chain B, Hydrophobic interactions: B:L.31, B:T.38, B:F.41, B:F.42, B:F.42, B:L.88, B:L.91, B:L.96, B:V.98, B:F.103, B:L.106, B:L.141 pi-Stacking: B:H.63 Metal complexes: B:H.92 HEM.3: 11 residues within 4Å: Chain C: Y.42, F.43, F.46, H.58, K.61, A.65, H.87, N.97, F.98, L.101, L.136 14 PLIP interactions: 13 interactions with chain C, 1 Ligand-Water interactions, Hydrophobic interactions: C:Y.42, C:Y.42, C:F.43, C:F.43, C:F.43, C:K.61, C:A.65, C:F.98 Water bridges: C:K.61 Salt bridges: C:H.58, C:K.61 pi-Stacking: C:H.58 Metal complexes: C:H.87, H2O.3 HEM.4: 16 residues within 4Å: Chain D: T.38, F.41, F.42, F.45, H.63, V.67, S.70, L.91, H.92, Q.95, L.96, V.98, N.102, F.103, L.106, L.141 17 PLIP interactions: 17 interactions with chain D, Hydrophobic interactions: D:F.41, D:F.41, D:F.42, D:F.42, D:F.42, D:L.91, D:L.96, D:V.98, D:N.102, D:F.103, D:L.106, D:L.141 Hydrogen bonds: D:Q.95 Salt bridges: D:H.63, D:K.66 pi-Stacking: D:H.63 Metal complexes: D:H.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Katz, D.S. et al., Structure determination of aquomet porcine hemoglobin at 2.8 A resolution. J.Mol.Biol. (1994)

Release Date

1994-11-30

Peptides

HEMOGLOBIN (AQUO MET) (ALPHA CHAIN): AC
HEMOGLOBIN (AQUO MET) (BETA CHAIN): BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

HEMOGLOBIN (AQUO MET) (ALPHA CHAIN)

HEMOGLOBIN (AQUO MET) (BETA CHAIN)

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