SMTL ID : 2pmf.1

The crystal structure of a human glycyl-tRNA synthetase mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

homo-dimer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: F.292, R.526, L.527, G.528, R.529 Ligand excluded by PLIP CL.3: 5 residues within 4Å: Chain B: F.292, R.526, L.527, G.528, R.529 Ligand excluded by PLIP

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: D.621, T.622, K.625, P.627, H.628, T.629, R.642 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.621, A:D.621, A:K.625, A:T.629, A:R.642 GOL.4: 7 residues within 4Å: Chain B: D.621, T.622, K.625, P.627, H.628, T.629, R.642 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:D.621, B:K.625, B:T.629, B:T.629, B:R.642

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xie, W. et al., Long-range structural effects of a Charcot-Marie- Tooth disease-causing mutation in human glycyl-tRNA synthetase. Proc.Natl.Acad.Sci.Usa (2007)

Release Date

2007-05-22

Peptides

Glycyl-tRNA synthetase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glycyl-tRNA synthetase