SMTL ID : 2pmy.2 (1 other biounit)

EF-hand domain of human RASEF

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-tetramer

Ligands

8 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: D.37, N.39, S.41, R.43, E.45, E.48 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.37, A:S.41, A:R.43, A:E.45, A:E.48 CA.2: 5 residues within 4Å: Chain A: D.71, D.73, D.75, A.77, E.82 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.71, A:D.73, A:D.75, A:A.77, A:E.82 CA.6: 6 residues within 4Å: Chain B: D.37, N.39, S.41, R.43, E.45, E.48 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.37, B:S.41, B:R.43, B:E.45, B:E.48 CA.7: 5 residues within 4Å: Chain B: D.71, D.73, D.75, A.77, E.82 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.71, B:D.73, B:D.75, B:A.77, B:E.82 CA.11: 6 residues within 4Å: Chain C: D.37, N.39, S.41, R.43, E.45, E.48 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:D.37, C:S.41, C:R.43, C:E.45, C:E.48 CA.12: 5 residues within 4Å: Chain C: D.71, D.73, D.75, A.77, E.82 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:D.71, C:D.73, C:D.75, C:A.77, H2O.1 CA.15: 6 residues within 4Å: Chain D: D.37, N.39, S.41, R.43, E.45, E.48 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:D.37, D:S.41, D:R.43, D:E.45, D:E.48 CA.16: 5 residues within 4Å: Chain D: D.71, D.73, D.75, A.77, E.82 5 PLIP interactions: 4 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:D.71, D:D.73, D:D.75, D:A.77, H2O.2

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: R.43, T.79 Chain D: R.69, R.85 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain D Water bridges: A:G.42, A:T.79 Salt bridges: A:R.43, D:R.69, D:R.85 SO4.8: 4 residues within 4Å: Chain B: R.43, T.79 Chain C: R.69, R.85 5 PLIP interactions: 2 interactions with chain C, 3 interactions with chain B Salt bridges: C:R.69, C:R.85, B:R.43 Water bridges: B:G.42, B:F.80

8 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.4: 2 residues within 4Å: Chain A: C.36, L.52 No protein-ligand interaction detected (PLIP) UNX.5: 1 residues within 4Å: Chain A: C.53 No protein-ligand interaction detected (PLIP) UNX.9: 2 residues within 4Å: Chain B: C.36, L.52 No protein-ligand interaction detected (PLIP) UNX.10: 1 residues within 4Å: Chain B: C.53 No protein-ligand interaction detected (PLIP) UNX.13: 3 residues within 4Å: Chain C: C.36, F.49, L.52 No protein-ligand interaction detected (PLIP) UNX.14: 2 residues within 4Å: Chain C: C.53, V.58 No protein-ligand interaction detected (PLIP) UNX.17: 3 residues within 4Å: Chain D: C.36, F.49, L.52 No protein-ligand interaction detected (PLIP) UNX.18: 2 residues within 4Å: Chain D: C.53, V.58 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, H. et al., EF-hand domain of human RASEF. To be Published

Release Date

2007-05-08

Peptides

RAS and EF-hand domain-containing protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
B

D
B

RAS and EF-hand domain-containing protein

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