- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-tetramer
- Ligands
- 2 x ACT: ACETATE ION(Non-functional Binders)
- 4 x NA: SODIUM ION(Non-functional Binders)
NA.2: 4 residues within 4Å:- Chain A: S.139, R.140, T.142
- Ligands: UD1.3
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:T.142
NA.5: 4 residues within 4Å:- Chain B: S.139, R.140, T.142
- Ligands: UD1.6
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:S.139
NA.9: 4 residues within 4Å:- Chain C: S.139, R.140, T.142
- Ligands: UD1.10
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:T.142, C:T.142
NA.12: 4 residues within 4Å:- Chain D: S.139, R.140, T.142
- Ligands: UD1.13
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:S.139, D:T.142
- 4 x UD1: URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE(Non-covalent)
UD1.3: 14 residues within 4Å:- Chain A: R.27, G.38, G.39, G.129, V.131, V.134, S.139, T.142, H.143, C.144, G.145, V.146, H.147
- Ligands: NA.2
13 PLIP interactions:13 interactions with chain A- Hydrophobic interactions: A:V.134
- Hydrogen bonds: A:R.27, A:G.38, A:G.39, A:T.142, A:T.142, A:G.145, A:G.145, A:H.147
- Water bridges: A:W.43, A:N.149
- Salt bridges: A:R.27, A:H.147
UD1.6: 14 residues within 4Å:- Chain B: R.27, G.38, G.39, G.129, V.131, V.134, S.139, T.142, H.143, C.144, G.145, V.146, H.147
- Ligands: NA.5
15 PLIP interactions:15 interactions with chain B- Hydrophobic interactions: B:V.134
- Hydrogen bonds: B:G.38, B:G.39, B:T.142, B:T.142, B:G.145, B:G.145, B:H.147
- Water bridges: B:R.27, B:R.27, B:R.27, B:W.43
- Salt bridges: B:R.27, B:R.27, B:H.147
UD1.10: 13 residues within 4Å:- Chain C: R.27, G.38, G.39, G.129, V.131, S.139, T.142, H.143, C.144, G.145, V.146, H.147
- Ligands: NA.9
15 PLIP interactions:15 interactions with chain C- Hydrogen bonds: C:R.27, C:G.39, C:T.142, C:T.142, C:G.145, C:G.145, C:H.147, C:H.147
- Water bridges: C:G.38, C:G.38, C:W.43, C:N.149
- Salt bridges: C:R.27, C:H.147
- pi-Stacking: C:H.147
UD1.13: 15 residues within 4Å:- Chain D: R.27, G.38, G.39, G.129, I.130, V.131, V.134, S.139, T.142, H.143, C.144, G.145, V.146, H.147
- Ligands: NA.12
14 PLIP interactions:14 interactions with chain D- Hydrophobic interactions: D:V.134
- Hydrogen bonds: D:G.39, D:T.142, D:T.142, D:G.145, D:G.145, D:H.147
- Water bridges: D:R.27, D:R.27, D:G.38, D:W.43
- Salt bridges: D:R.27, D:R.27, D:H.147
- 4 x M6R: 5-AMINO-5-DEOXY-1-O-PHOSPHONO-D-MANNITOL(Non-covalent)
M6R.4: 13 residues within 4Å:- Chain A: C.58, G.59, T.60, S.61, S.105, Q.106, S.107, T.110, V.156, A.157, S.158, K.243, E.246
13 PLIP interactions:13 interactions with chain A- Hydrogen bonds: A:C.58, A:T.60, A:T.60, A:S.61, A:S.105, A:S.105, A:Q.106, A:S.107, A:S.158, A:K.243, A:E.246
- Water bridges: A:Q.106, A:S.113
M6R.7: 13 residues within 4Å:- Chain B: C.58, G.59, T.60, S.61, S.105, Q.106, S.107, T.110, V.156, A.157, S.158, K.243, E.246
16 PLIP interactions:16 interactions with chain B- Hydrogen bonds: B:C.58, B:T.60, B:T.60, B:S.61, B:S.61, B:S.105, B:S.105, B:Q.106, B:S.107, B:T.110, B:S.158, B:K.243, B:E.246
- Water bridges: B:Q.106, B:Q.106, B:S.113
M6R.11: 13 residues within 4Å:- Chain C: C.58, G.59, T.60, S.61, S.105, Q.106, S.107, T.110, V.156, A.157, S.158, K.243, E.246
16 PLIP interactions:16 interactions with chain C- Hydrogen bonds: C:C.58, C:T.60, C:T.60, C:S.61, C:S.105, C:S.105, C:Q.106, C:S.107, C:S.158, C:K.243, C:K.243, C:E.246
- Water bridges: C:S.61, C:S.61, C:Q.106, C:S.113
M6R.14: 13 residues within 4Å:- Chain D: C.58, G.59, T.60, S.61, S.105, Q.106, S.107, T.110, V.156, A.157, S.158, K.243, E.246
16 PLIP interactions:16 interactions with chain D- Hydrogen bonds: D:C.58, D:T.60, D:T.60, D:S.61, D:S.61, D:S.105, D:S.105, D:Q.106, D:S.107, D:T.110, D:S.158, D:K.243, D:E.246
- Water bridges: D:Q.106, D:Q.106, D:S.113
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Raczynska, J. et al., The Crystal and Solution Studies of Glucosamine-6-phosphate Synthase from Candida albicans. J.Mol.Biol. (2007)
- Release Date
- 2007-09-11
- Peptides
- isomerase domain of glutamine-fructose-6-phosphate transaminase (isomerizing): ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-tetramer
- Ligands
- 2 x ACT: ACETATE ION(Non-functional Binders)
- 4 x NA: SODIUM ION(Non-functional Binders)
- 4 x UD1: URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE(Non-covalent)
- 4 x M6R: 5-AMINO-5-DEOXY-1-O-PHOSPHONO-D-MANNITOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Raczynska, J. et al., The Crystal and Solution Studies of Glucosamine-6-phosphate Synthase from Candida albicans. J.Mol.Biol. (2007)
- Release Date
- 2007-09-11
- Peptides
- isomerase domain of glutamine-fructose-6-phosphate transaminase (isomerizing): ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D