SMTL ID : 2pya.1

Ultra-high resolution structure of P. abyssi rubredoxin W4L/R5S/A44S

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.86 Å

Oligo State

monomer

Ligands

1 x FE: FE (III) ION(Non-covalent)

FE.1: 8 residues within 4Å: Chain A: C.5, I.7, C.8, Y.10, C.38, L.40, C.41, S.43 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.5, A:C.8, A:C.38, A:C.41

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 1 residues within 4Å: Chain A: N.21 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.21, A:N.21 NA.3: 2 residues within 4Å: Chain A: E.30, D.31 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bonisch, H. et al., Ultrahigh-resolution study on Pyrococcus abyssi rubredoxin: II. Introduction of an O-H...Sgamma-Fe hydrogen bond increased the reduction potential by 65 mV. J.Biol.Inorg.Chem. (2007)

Release Date

2008-04-29

Peptides

Rubredoxin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Rubredoxin