SMTL ID : 2pyn.1

HIV-1 PR mutant in complex with nelfinavir

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

1 x 1UN: 2-[2-HYDROXY-3-(3-HYDROXY-2-METHYL-BENZOYLAMINO)-4-PHENYL SULFANYL-BUTYL]-DECAHYDRO-ISOQUINOLINE-3-CARBOXYLIC ACID TERT-BUTYLAMIDE(Non-covalent)

1UN.1: 23 residues within 4Å: Chain A: D.25, G.27, A.28, D.29, N.30, G.48, G.49, I.50, T.80, P.81, I.84 Chain B: R.8, L.23, D.25, G.27, V.32, I.47, G.48, G.49, I.50, P.81, V.82, I.84 22 PLIP interactions: 13 interactions with chain A, 9 interactions with chain B Hydrophobic interactions: A:A.28, A:D.29, A:I.50, A:I.50, A:P.81, A:I.84, B:L.23, B:I.47, B:I.50, B:P.81, B:V.82, B:I.84 Hydrogen bonds: A:D.25, A:G.27, A:D.29, A:N.30, A:N.30 Water bridges: A:I.50, B:G.27, B:I.50 Salt bridges: A:D.25, B:D.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kozisek, M. et al., Molecular analysis of the HIV-1 resistance development: enzymatic activities, crystal structures, and thermodynamics of nelfinavir-resistant HIV protease mutants. J.Mol.Biol. (2007)

Release Date

2008-02-26

Peptides

PROTEASE RETROPEPSIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PROTEASE RETROPEPSIN